An S4 class for working with Hi-C data — Hicexp-class • multiHiCcompare

An S4 class for working with Hi-C data

Value

Hicexp class

Slots

hic_table: A data.table containing the sparse upper triangular matrix for your Hi-C data.
comparison: The results of a multiHiCcompare comparison.
metadata: Data.frame for covariate information.
resolution: The resolution of the dataset.
normalized: Indicator for if data has been normalized.

Examples

data('hicexp2')
hicexp2
#> Hi-C Experiment Object 
#> 2 experimental groups 
#> Group 1 has 2 samples 
#> Group 2 has 2 samples