Convert HiCdiff results to InteractionSet object

make_InteractionSet(hic.table)

Arguments

hic.table	A hic.table object.

Value

An object of class InteractionSet

Details

This function will convert data from HiCdiff results in the hic.table object format to the InteractionSet format which makes use of GRanges objects.

Examples

# create hic.table
data(HMEC.chr22)
data(NHEK.chr22)
hic.table <- create.hic.table(HMEC.chr22, NHEK.chr22, chr='chr22')
# convert to InteractionSet
gi <- make_InteractionSet(hic.table)