All functions |
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T2T.CHM13.chm13.draft_v1.1.telomere |
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T2T.CHM13.chm13.draft_v2.0.cen_mask |
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T2T.Lareau.chm13v2.0_peaks |
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T2T.UCSC.censat |
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T2T.UCSC.gap |
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T2T.UCSC.hgUnique.hg38 |
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T2T.excluderanges |
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TAIR10.Klasfeld.arabidopsis_Excludable_20inputs |
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TAIR10.Klasfeld.arabidopsis_greenscreen_20inputs |
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TAIR10.UCSC.araTha1.gap |
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TAIR10.Wimberley.predicted_excluded_list_sorted_0.6 |
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ce10.Boyle.ce10-Excludable.v2 |
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ce10.Kundaje.ce10-Excludable |
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ce11.Boyle.ce11-Excludable.v2 |
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danRer10.Domingues.Excludableed |
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danRer10.UCSC.contig |
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danRer10.UCSC.scaffold |
|
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danRer10.Yang.Supplemental_Table_19.ChIP-seq_black_list_in_the_zebrafish_genome |
dm3.Boyle.dm3-Excludable.v2 |
|
dm3.Kundaje.dm3-Excludable |
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dm3.UCSC.contig |
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dm3.UCSC.scaffold |
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dm6.Boyle.dm6-Excludable.v2 |
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dm6.UCSC.other |
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excluderanges: Genomic coordinates of problematic genomic regions |
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hg19.Bernstein.Mint_Excludable_hg19 |
|
hg19.Birney.wgEncodeDacMapabilityConsensusExcludable |
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hg19.Boyle.hg19-Excludable.v2 |
|
hg19.Crawford.wgEncodeDukeMapabilityRegionsExcludable |
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hg19.Lareau.hg19.full.Excludable |
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hg19.Lareau.hg19_peaks |
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hg19.UCSC.centromere |
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hg19.UCSC.clone |
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hg19.UCSC.contig |
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hg19.UCSC.heterochromatin |
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hg19.UCSC.numtS |
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hg19.UCSC.scaffold |
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hg19.UCSC.short_arm |
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hg19.UCSC.telomere |
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hg19.Wold.hg19mitoExcludable |
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hg19.Yeo.eCLIP_Excludableregions.hg19 |
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hg38.Bernstein.Mint_Excludable_GRCh38 |
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hg38.Boyle.hg38-Excludable.v2 |
|
hg38.Kundaje.GRCh38.Excludable |
|
hg38.Kundaje.GRCh38_unified_Excludable |
|
hg38.Lareau.hg38.full.Excludable |
|
hg38.Lareau.hg38_peaks |
|
hg38.Reddy.wgEncodeDacMapabilityConsensusExcludable.hg38 |
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hg38.UCSC.centromere |
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hg38.UCSC.contig |
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hg38.UCSC.heterochromatin |
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hg38.UCSC.scaffold |
|
hg38.UCSC.short_arm |
|
hg38.UCSC.telomere |
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hg38.Wimberley.peakPass60Perc_sorted |
|
hg38.Wold.hg38mitoExcludable |
|
hg38.Yeo.eCLIP_Excludableregions.hg38liftover.bed.fixed |
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mm10.Boyle.mm10-Excludable.v2 |
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mm10.Hardison.Excludable.full |
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mm10.Hardison.psuExcludable.mm10 |
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mm10.Kundaje.anshul.Excludable.mm10 |
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mm10.Kundaje.mm10.Excludable |
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mm10.Lareau.mm10.full.Excludable |
|
mm10.Lareau.mm10_peaks |
|
mm10.UCSC.centromere |
|
mm10.UCSC.clone |
|
mm10.UCSC.contig |
|
mm10.UCSC.fragment |
|
mm10.UCSC.other |
|
mm10.UCSC.scaffold |
|
mm10.UCSC.short_arm |
|
mm10.UCSC.telomere |
|
mm10.Wold.mm10mitoExcludable |
|
mm39.UCSC.centromere |
|
mm39.UCSC.contig |
|
mm39.UCSC.scaffold |
|
mm39.UCSC.short_arm |
|
mm39.UCSC.telomere |
|
mm39.excluderanges |
|
mm9.Lareau.mm9.full.Excludable |
|
mm9.Lareau.mm9_peaks |
|
mm9.UCSC.centromere |
|
mm9.UCSC.contig |
|
mm9.UCSC.fragment |
|
mm9.UCSC.numtS |
|
mm9.Wold.mm9mitoExcludable |